Publication (1996-2018) 

1.        Heui-Soo Kim and Takenaka O. 1996. A comparison of TSPY genes from Y?chromosomal DNA of the great apes and humans: Sequence, evolution, and phylogeny. Am. J. Phys. Anthropol. 100(3): 301-309.

 

2.        Heui-Soo Kim, Hirai H., and Takenaka O. 1996. Molecular features of theTSPY gene of gibbons and Old World monkeys. Chromosome Res. 4(7): 500-506.

 

3.        Heui-Soo Kim, Kageyama T., Nakamura S., and Takenaka O. 1997. Nucleotide sequence of cDNA and the gene expression of testis-specific protein Y in the Japanese monkey. Zoolog. Sci. 14(4): 609-614.

 

4.        Mwenda J.M., Takenaka O., Heui-Soo Kim, Yamamoto T., Gurja B., Katsumata Y., Bambra C.S., Uchihi R., and Shotake T. 1997. Major histocompatibility complex DQA1 nucleotide sequences of gelada baboon (Theropithecus gelada), olive baboon (Papio anubis), and yellow baboon (Papio cynocephalus). Immunogenetics. 46(4): 365-366.

 

5.        Mwenda J.M., Takenaka O., Heui-Soo Kim, Yamamoto T., Katsumata Y., Bambra C.S., Uchihi R., and Shotake T. 1997. Nucleotide sequences of the major histocompatibility complex DQA1 locus of Cercopithecus monkeys. Immunogenetics. 46(4): 363-364.

 

6.        Heui-Soo Kim and Takenaka O. 1997. Evolution of DNA on Y-chromosome in hominoid primates as examined by PCR. Hum. Evol. 12(4): 233-239.

 

7.        Heui-Soo Kim 1998. Human ADP-ribosylation factor 4 (ARF4) gene Map position 3p14. 1. Chromosome Res. 6(8): 663.

 

8.        Heui-Soo Kim and Crow T.J. 1998. Human proto-oncogene Int-2/FGF-3. Map position 11q13.3-q13.4. Chromosome Res. 6(7): 579.

 

9.        Heui-Soo Kim and Crow T.J. 1998. Human endogenous retrovirus HC2. Map position 10q26. Chromosome Res. 6(7): 579.

 

10.      Heui-Soo Kim and Crow T.J. 1998. Assignment of the human endogenous retrovirus S71 (SSAV1) to chromosome 18 band q12.3 by radiation hybrid mapping. Cytogenet. Cell Genet. 83(3-4): 207.

 

11.      Heui-Soo Kim 1998. Assignment of the human ADP-ribosylation factor-like 3 (ARL3) gene to chromosome 10 band q23. 3 by radiation hybrid mapping. Cytogenet. Genome Res. 83(3-4): 246.

 

12.      Heui-Soo Kim 1998. Assignment of the human ARNO3 gene (PSCD3) to chromosome 7p21 by radiation hybrid mapping. Ann. Hum. Genet. 62(06): 531-550.

 

13.      Heui-Soo Kim 1998. Assignment of the human basic fibroblast growth factor gene FGF2 to chromosome 4 band q26 by radiation hybrid mapping. Cytogenet. Genome Res. 83(1-2): 73.

 

14.      Heui-Soo Kim 1998. Assignment of the human cts18. 1 gene PSCD2L to chromosome 19 band q13 using a radiation hybrid mapping panel. Cytogenet. Genome Res. 83(1-2): 43.

 

15.      Heui-Soo Kim and Crow T. 1998. Human DXYS156 of pentanucleotide repeat (TAAAA) n: chromosomal localization by somatic hybrid mapping and sequencing analysis. Cytogenet. Genome Res. 83(1-2): 54-55.

 

16.      Heui-Soo Kim 1998. Human cts18. 1 gene: chromosomal localization and PH-domain analysis. Genes Genet. Syst. 73(5): 293-296.

 

17.      Heui-Soo Kim, Chen Y., and Lonai P. 1998. Complex regulation of multiple cytohesin-like genes in murine tissues and cells. FEBS Lett. 433(3): 312-316.

 

18.      Heui-Soo Kim 1999. Assignment of the human OB binding protein-2 gene (CD33L2) to chromosome 19q13. 3 by radiation hybrid mapping. Cytogenet. Genome Res. 84(1-2): 96.

 

19.      Heui-Soo Kim 1999. Assignment of the human B3-1 gene (PSCDBP) to chromosome 2 band q11. 2 by radiation hybrid mapping. Cytogenet. Genome Res. 84(1-2): 95.

 

20.      Heui-Soo Kim 1999. Assignment of the human ADP-ribosylation factor 6 (ARF6) gene to chromosome 7q22. 1 by radiation hybrid mapping. Cytogenet. Genome Res. 84(1-2): 94.

 

21.      Heui-Soo Kim 1999. Assignment of human interleukin 16 (IL16) to chromosome 15q26. 3 by radiation hybrid mapping. Cytogenet. Genome Res. 84(1-2): 93.

 

22.      Heui-Soo Kim 1999. Ribosomal protein S4 gene of the African green monkey (Cercopithecus aethiops). Folia Primatol. (Basel). 70(3): 177-179.

 

23.      Heui-Soo Kim, Takenaka O., and Crow T.J. 1999. Identification of human endogenous retrovirus HC2-like elements in primates. Folia Primatol. (Basel). 70(5): 295-297.

 

24.      Heui-Soo Kim, Winstanley C., Wadekar R.V., Takenaka O., Mitsunaga F., Kageyama T., Hyun B.-H., and Crow T.J. 1999. Two tetranucleotide repeats within the Xq21. 3/Yp11. 2 human specific region of homology and their conservation in primate evolution. Zoolog. Sci. 16(2): 357-362.

 

25.      Heui-Soo Kim, Wadekar R.V., Takenaka O., Winstanley C., Mitsunaga F., Kageyama T., Hyun B.H., and Crow T.J. 1999. SINE-R.C2 (a Homo sapiens specific retroposon) is homologous to CDNA from postmortem brain in schizophrenia and to two loci in the Xq21.3/Yp block linked to handedness and psychosis. Am. J. Med. Genet. 88(5): 560-566.

 

26.      Heui-Soo Kim and Crow T.J. 1999. Isolation of novel human endogenous retrovirus HC2-like elements in human chromosomes. AIDS Res. Hum. Retroviruses. 15(3): 299-302.

 

27.      Heui-Soo Kim, Takenaka O., and Crow T.J. 1999. Cloning and nucleotide sequence of retroposons specific to hominoid primates derived from an endogenous retrovirus (HERV-K). AIDS Res. Hum. Retroviruses. 15(6): 595-601.

 

28.      Heui-Soo Kim, Wadekar R.V., Takenaka O., Hyun B.-H., and Crow T.J. 1999. Phylogenetic analysis of a retroposon family in African great apes. J. Mol. Evol. 49(5): 699-702.

 

29.      Heui-Soo Kim, Wadekar R.V., Takenaka O., Hyun B.H., and Crow T.J. 1999. Phylogenetic analysis of HERV-K LTR-like elements in primates: presence in some new world monkeys and evidence of recent parallel evolution in these species and in homo sapiens. Arch. Virol. 144(10): 2035-2040.

 

30.      Heui-Soo Kim, Takenaka O., and Crow T.J. 1999. Isolation and phylogeny of endogenous retrovirus sequences belonging to the HERV-W family in primates. J. Gen. Virol. 80 ( Pt 10): 2613-2619.

 

31.      Heui-Soo Kim and Crow T.J. 1999. Identification and phylogenetic analysis of novel human endogenous retroviral sequences belonging to the HERV-H family on human X and Y chromosomes. Genes Genet. Syst. 74(4): 129-134.

 

32.      Heui-Soo Kim and Crow T.J. 1999. Identification and phylogeny of novel human endogenous retroviral sequences belonging to the HERV-W family on the human X chromosome. Arch. Virol. 144(12): 2403-2413.

 

33.      Heui-Soo Kim and Crow T.J. 1999. Presence and phylogenetic analysis of HERV-K LTR on human X and Y chromosomes: evidence for recent proliferation. Genes Genet. Syst. 74(5): 267-270.

 

34.      Heui-Soo Kim and Crow T.J. 1999. Presence and phylogenetic relationships of a hominoid-specific retroposon family on the human Y chromosome. Zoolog. Sci. 16(6): 963-970.

 

35.      Heui-Soo Kim and Crow T.J. 2000. Phylogenetic relationships of a class of hominoid-specific retro-elements (SINE-R) on human chromosomes 7 and 17. Ann. Hum. Biol. 27(1): 83-93.

 

36.      Heui-Soo Kim, Choi J.-Y., Jung A.-R., Jang K.-L., Lee W.-H., Choi W.-C., Crow T., and Hyun B.-H. 2000. Assignment of the human RhoHP1 gene (ARHD) to chromosome 11q14. 3 by radiation hybrid mapping. Cytogenet. Genome Res. 89(1-2): 53.

 

37.      Heui-Soo Kim, Crow T.J., and Hyun B.H. 2000. Assignment of the endogenous retrovirus HERV-R (ERV3) to human chromosome 7q11.2 by radiation hybrid mapping. Cytogenet. Cell Genet. 89(1-2): 10.

 

38.      Heui-Soo Kim, Hyun B.H., and Crow T.J. 2000. Phylogenetic analysis of retroposon family as exemplified on human chromosome 13: further evidence for recent proliferation. Mol. Cells. 10(3): 356-360.

 

39.      Heui-Soo Kim and Takenaka O. 2000. Evolution of the X-linked zinc finger gene and the Y-linked zinc finger gene in primates. Mol. Cells. 10(5): 512-518.

 

40.      Heui-Soo Kim, Hyun B.H., Choi J.Y., and Crow T.J. 2000. Phylogenetic analysis of a retroposon family as represented on the human X chromosome. Genes Genet. Syst. 75(4): 197-202.

 

41.      Heui-Soo Kim, Choi J.Y., Lee W.H., Jang K.L., and Hyun B.H. 2000. Nucleotide sequence and phylogenetic analysis of long terminal repeats of human endogenous retrovirus K family (HERV-K) on human chromosomes. Microb. Comp. Genomics. 5(3): 121-127.

 

42.      Hashimoto C., Hayakawa S., Heui-Soo Kim, and Takenaka O. 2000. Sex identification using PCR with non-invasive samples in chimpanzee, bonobos and Japanese macaques. Primate Res. 16(2): 133-138.

 

43.      Lee J.M., Choi J.Y., Kim J.S., Hyun B.H., and Heui-Soo Kim 2000. Identification and phylogeny of new human endogenous retroviral sequences belonging to the HERV-H family. AIDS Res. Hum. Retroviruses. 16(18): 2055-2058.

44.      Choi J.Y., Kim J.S., Lee J.M., Hyun B.H., and Heui-Soo Kim 2001. Isolation and phylogeny of new endogenous retroviral sequences belonging to the HERV-F family. AIDS Res. Hum. Retroviruses. 17(4): 367-370.

 

45.      Heui-Soo Kim and Lee W.H. 2001. Human endogenous retrovirus HERV-W family: chromosomal localization, identification, and phylogeny. AIDS Res. Hum. Retroviruses. 17(7): 643-648.

 

46.      Heui-Soo Kim, Yi J.M., and Jeon S.H. 2001. Isolation and phylogenetic analysis of HERV-K long terminal repeat cDNA in cancer cells. AIDS Res. Hum. Retroviruses. 17(10): 987-990.

 

47.      Heui-Soo Kim 2001. The human FGF gene family: chromosome location and phylogenetic analysis. Cytogenet. Genome Res. 93(1-2): 131-132.

48.      Yi J.M., Kim H.M., and Heui-Soo Kim 2001. Molecular cloning and phylogenetic analysis of the human endogenous retrovirus HERV-K long terminal repeat elements in various cancer cells. Mol. Cells. 12(1): 137-141.

 

49.      Heui-Soo Kim and Takenaka O. 2001. Phylogeny of SINE-R retroposons in Asian apes. Mol. Cells. 12(2): 262-266.

 

50.      Heui-Soo Kim 2001. Sequence and phylogeny of HERV-W pol fragments. AIDS Res. Hum. Retroviruses. 17(17): 1665-1671.

 

51.      Yi J.M., Lee W.H., Kim H.M., and Heui-Soo Kim 2001. Identification of new endogenous retroviral sequences belonging to the HERV-W family in human cancer cells. Intervirology. 44(6): 333-338.

 

52.      Yi J.M., Kim H.M., Lee W.H., and Heui-Soo Kim 2002. Molecular cloning and phylogenetic analysis of new human endogenous retrovirus HERV-W family in cancer cells. Curr. Microbiol. 44(3): 216-220.

 

53.      Heui-Soo Kim, Hyun B.H., and Takenaka O. 2002. Isolation and phylogeny of endogenous retrovirus HERV-F family in Old World monkeys. Brief report. Arch. Virol. 147(2): 393-400.

 

54.      Koshio C., Tomishima M., Shimizu K., Heui-Soo Kim, and Takenaka O. 2002. Microsatellites in the gypsy moth, Lymantria dispar L.(Lepidoptera: Lymantriidae). Appl. Entomol. Zoolog. 37(2): 309-312.

 

55.      Heui-Soo Kim and Crow T.J. 2002. Identification and Phylogeny of the Human Endogenous Retrovirus HERV-W LTR Family in Human Brain cDNA Library and Xq21.3 Region. J. Microbiol. Biotechnol. 12(3): 508-513.

 

56.      Huh J.W., Hong K.W., Yi J.M., Kim T.H., Takenaka O., Lee W.H., and Heui-Soo Kim 2003. Molecular phylogeny and evolution of the human endogenous retrovirus HERV-W LTR family in hominoid primates. Mol. Cells. 15(1): 122-126.

 

57.      Yi J.M., Takenaka O., and Heui-Soo Kim 2003. Molecular characterization and phylogenetic relationship of HERV-W family in the Macaca fuscata. Arch. Virol. 148(8): 1613-1622.

 

58.      Yi J.M., Kim T.H., Huh J.I., Nakamura S., Takenaka O., Lee W.H., Hyun B.H., and Heui-Soo Kim 2003. Endogenous retrovirus HC2 pol fragments in the squirrel monkey: expression, evolution, and phylogeny. Arch. Virol. 148(11): 2257-2265.

 

59.      Yi J.M. and Heui-Soo Kim 2004. Expression analysis of endogenous retroviral elements belonging to the HERV-F family from human tissues and cancer cells. Cancer Lett. 211(1): 89-96.

 

60.      Yi J.M. and Heui-Soo Kim 2004. Evolutionary implication of human endogenous retrovirus HERV-H family. J. Hum. Genet. 49(4): 215-219.

 

61.      Yi J.M., Kim H.M., and Heui-Soo Kim 2004. Expression of the human endogenous retrovirus HERV-W family in various human tissues and cancer cells. J. Gen. Virol. 85(Pt 5): 1203-1210.

 

62.      Yi J.M., Takenaka O., and Heui-Soo Kim 2004. Expression and identification of HERV-W family in Japanese monkeys (Macaca fuscata). Zoolog. Sci. 21(6): 649-659.

 

63.      Rovio A.T., Abel J., Ahola A.L., Andres A.M., Bertranpetit J., Blancher A., Bontrop R.E., Chemnick L.G., Cooke H.J., Cummins J.M., Davis H., Elliott D., Fritsche E., Hargreave T., Hoffman S., Jequier A., Kao S.-H., Heui-Soo Kim, Marchington D., Mehmet D., Otting N., Poulton J., Ryder O., Schuppe H.-C., Takenaka O., Wei Y.-H., Wichmann L., and Jacobs H. 2004. A prevalent POLG CAG microsatellite length allele in humans and African great apes. Mamm. Genome. 15(6): 492-502.

 

64.      Kim T.H., Jeon Y.J., Yi J.M., Kim D.S., Huh J.W., Hur C.G., and Heui-Soo Kim 2004. The distribution and expression of HERV families in the human genome. Mol. Cells. 18(1): 87-93.

 

65.      Yi J.M., Kim T.H., Huh J.W., Park K.S., Jang S.B., Kim H.M., and Heui-Soo Kim 2004. Human endogenous retroviral elements belonging to the HERV-S family from human tissues, cancer cells, and primates: expression, structure, phylogeny and evolution. Gene. 342(2): 283-292.

 

66.      Hirai H., Matsubayashi K., Kumazaki K., Kato A., Maeda N., and Heui-Soo Kim 2005. Chimpanzee chromosomes: retrotransposable compound repeat DNA organization (RCRO) and its influence on meiotic prophase and crossing-over. Cytogenet. Genome Res. 108(1-3): 248-254.

 

67.      Yi J.M., Takenaka O., and Heui-Soo Kim 2005. Molecular cloning and phylogeny of HERV-E family that is expressed in Japanese monkey (Macaca fuscata) tissues. Arch. Virol. 150(5): 869-882.

 

68.      Kim T.H., Jeon Y.J., Kim W.Y., and Heui-Soo Kim 2005. HESAS: HERVs Expression and Structure Analysis System. Bioinformatics. 21(8): 1699-1700.

 

69.      Park E.S., Huh J.W., Kim T.H., Kwak K.D., Kim W., and Heui-Soo Kim 2005. Analysis of newly identified low copy AluYj subfamily. Genes Genet. Syst. 80(6): 415-422.

 

70.      Yi J.M., Kim H.M., and Heui-Soo Kim 2006. Human endogenous retrovirus HERV-H family in human tissues and cancer cells: expression, identification, and phylogeny. Cancer Lett. 231(2): 228-239.

 

71.      Yi J.M. and Heui-Soo Kim 2006. Molecular evolution of the HERV-E family in primates. Arch. Virol. 151(6): 1107-1116.

 

72.      Heui-Soo Kim, Yi J.M., Hirai H., Huh J.W., Jeong M.S., Jang S.B., Kim C.G., Saitou N., Hyun B.H., and Lee W.H. 2006. Human Endogenous Retrovirus (HERV)-R family in primates: Chromosomal location, gene expression, and evolution. Gene. 370: 34-42.

 

73.      Huh J.W., Kim T.H., Yi J.M., Park E.S., Kim W.Y., Sin H.S., Kim D.S., Min D.S., Kim S.S., Kim C.B., Hyun B.H., Kang S.K., Jung J.S., Lee W.H., Takenaka O., and Heui-Soo Kim 2006. Molecular evolution of the periphilin gene in relation to human endogenous retrovirus m element. J. Mol. Evol. 62(6): 730-737.

 

74.      Lee J.W. and Heui-Soo Kim 2006. Endogenous retrovirus HERV-I LTR family in primates: sequences, phylogeny, and evolution. Arch. Virol. 151(8): 1651-1658.

 

75.      Sin H.S., Huh J.W., Kim D.S., Kang D.W., Min D.S., Kim T.H., Ha H.S., Kim H.H., Lee S.Y., and Heui-Soo Kim 2006. Transcriptional control of the HERV-H LTR element of the GSDML gene in human tissues and cancer cells. Arch. Virol. 151(10): 1985-1994.

 

76.      Kim D.S., Kim T.H., Huh J.W., Kim I.C., Kim S.W., Park H.S., and Heui-Soo Kim 2006. LINE FUSION GENES: a database of LINE expression in human genes. BMC Genomics. 7: 139.

 

77.      Sin H.S., Huh J.W., Kim D.S., Kim T.H., Ha H.S., Kim W.Y., Park H.K., Kim C.M., and Heui-Soo Kim 2006. Endogenous retrovirus-related sequences provide an alternative transcript of MCJ genes in human tissues and cancer cells. Genes Genet. Syst. 81(5): 333-339.

 

78.      Heui-Soo Kim 2006. Role of HERVs in primate genome evolution. Cellscience. 3(2): 7-14.

 

79.      Jin J.-K., Kim N.-H., Lee Y.-J., Kim Y.-S., Choi E.-K., Kozlowski P.B., Park M.H., and Heui-Soo Kim 2006. Phospholipase D1 is up-regulated in the mitochondrial fraction from the brains of Alzheimer's disease patients. Neurosci. Lett. 407(3): 263-267.

 

80.      Huh J.W., Kim D.S., Ha H.S., Kim T.H., Kim W., and Heui-Soo Kim 2006. Formation of a new solo-LTR of the human endogenous retrovirus H family in human chromosome 21. Mol. Cells. 22(3): 360-363.

 

81.      Yi J.M., Schuebel K., and Heui-Soo Kim 2007. Molecular genetic analyses of human endogenous retroviral elements belonging to the HERV-P family in primates, human tissues, and cancer cells. Genomics. 89(1): 1-9.

 

82.      Yi J.M. and Heui-Soo Kim 2007. Molecular phylogenetic analysis of the human endogenous retrovirus E (HERV-E) family in human tissues and human cancers. Genes Genet. Syst. 82(1): 89-98.

 

83.      Yi J.M. and Heui-Soo Kim 2007. Expression and phylogenetic analyses of human endogenous retrovirus HC2 belonging to the HERV-T family in human tissues and cancer cells. J. Hum. Genet. 52(4): 285-296.

 

84.      Kim D.S., Huh J.W., and Heui-Soo Kim 2007. Transposable elements in human cancers by genome-wide EST alignment. Genes Genet. Syst. 82(2): 145-156.

85.      Kim D.-S., Huh J.-W., and Heui-Soo Kim 2007. HYBRIDdb: a database of hybrid genes in the human genome. BMC Genomics. 8(1): 128.

 

86.      Ha H.S., Huh J.W., Kim D.S., Kang D.W., Cho B.W., and Heui-Soo Kim 2007. Promoter activity of the long terminal repeats of porcine endogenous retroviruses of the Korean domestic pig. Mol. Cells. 24(1): 148-151.

 

87.      Huh J.W., Cho B.W., Kim D.S., Ha H.S., Noh Y.N., Yi J.M., Lee W.H., and Heui-Soo Kim 2007. Long terminal repeats of porcine endogenous retroviruses in Sus scrofa. Arch. Virol. 152(12): 2271-2276.

 

88.      Heui-Soo Kim, Kim D.S., Huh J.W., Ahn K., Yi J.M., Lee J.R., and Hirai H. 2008. Molecular characterization of the HERV-W env gene in humans and primates: expression, FISH, phylogeny, and evolution. Mol. Cells. 26(1): 53-60.

 

89.      Huh J.W., Kim D.S., Kang D.W., Ha H.S., Ahn K., Noh Y.N., Min D.S., Chang K.T., and Heui-Soo Kim 2008. Transcriptional regulation of GSDML gene by antisense-oriented HERV-H LTR element. Arch. Virol. 153(6): 1201-1205.

 

90.      Huh J.W., Ha H.S., Kim D.S., and Heui-Soo Kim 2008. Placenta-restricted expression of LTR-derived NOS3. Placenta. 29(7): 602-608.

 

91.      Heui-Soo Kim, Ahn K., and Kim D.S. 2008. Quantitative expression of the HERV-W env gene in human tissues. Arch. Virol. 153(8): 1587-1591.

 

92.      Huh J.W., Kim D.S., Ha H.S., Lee J.R., Kim Y.J., Ahn K., Lee S.R., Chang K.T., and Heui-Soo Kim 2008. Cooperative exonization of MaLR and AluJo elements contributed an alternative promoter and novel splice variants of RNF19. Gene. 424(1-2): 63-70.

 

93.      Kim Y.J., Huh J.W., Kim D.S., Bae M.I., Lee J.R., Ha H.S., Ahn K., Kim T.O., Song G.A., and Heui-Soo Kim 2009. Molecular characterization of the DYX1C1 gene and its application as a cancer biomarker. J. Cancer Res. Clin. Oncol. 135(2): 265-270.

 

94.      Lee J., Han K., Meyer T.J., Heui-Soo Kim, and Batzer M.A. 2008. Chromosomal inversions between human and chimpanzee lineages caused by retrotransposons. PLoS One. 3(12): e4047.

 

95.      Huh J.W., Kim D.S., Ha H.S., Ahn K., Chang K.T., Cho B.W., and Heui-Soo Kim 2009. Identification and molecular characterization of PERV gamma1 long terminal repeats. Mol. Cells. 27(1): 119-123.

 

96.      Lee J.R., Huh J.W., Kim D.S., Ha H.S., Ahn K., Kim Y.J., Chang K.T., and Heui-Soo Kim 2009. Lineage specific evolutionary events on SFTPB gene: Alu recombination-mediated deletion (ARMD), exonization, and alternative splicing events. Gene. 435(1-2): 29-35.

 

97.      Ahn K. and Heui-Soo Kim 2009. Structural and quantitative expression analyses of HERV gene family in human tissues. Mol. Cells. 28(2): 99-103.

 

98.      Huh J.W., Kim Y.H., Lee S.R., Kim H., Kim D.S., Heui-Soo Kim, Kang H.S., and Chang K.T. 2009. Gain of new exons and promoters by lineage-specific transposable elements-integration and conservation event on CHRM3 gene. Mol. Cells. 28(2): 111-117.

 

99.      Kim D.-S., Cho C.-Y., Huh J.-W., Heui-Soo Kim, and Cho H.-G. 2009. EVOG: a database for evolutionary analysis of overlapping genes. Nucleic Acids Res. 37(suppl 1): D698-D702.

 

100.     Huh J.-W., Kim D.-S., Ha H.-S., Ahn K., Chang K.-T., Cho B.-W., and Heui-Soo Kim 2009. Identification and molecular characterization of PERV gamma1 long terminal repeats. Mol. Cells. 27(1): 119-123.

 

101.     Kang K.H., Higashino A., Heui-Soo Kim, Lee Y.T., and Kageyama T. 2009. Molecular cloning, gene expression, and tissue distribution of adiponectin and its receptors in the Japanese monkey, Macaca fuscata. J. Med. Primatol. 38(2): 77-85.

 

102.     Huh J.-W., Kim D.-S., Noh Y.-N., Park S.-J., Ha H.-S., Kim C.-G., Lee Y.-H., Kang C.-K., Chang K.-T., and Heui-Soo Kim 2009. Dynamic evolution of tRNAThr-derivedHpaI SINEs and effect on genomes ofOncorhynchus species. Genes Genom. 31(3): 217-226.

 

103.     Li J., Han K., Xing J., Heui-Soo Kim, Rogers J., Ryder O.A., Disotell T., Yue B., and Batzer M.A. 2009. Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements. Gene. 448(2): 242-249.

 

104.     Huh J.-W., Kim Y.-H., Lee S.-R., Kim D.-S., Park S.-J., Kim H., Kim J.-S., Song B.-S., Heui-Soo Kim, and Chang K.-T. 2010. Four different ways of alternative transcripts generation mechanism in ADRA1A gene. Genes Genet. Syst. 85(1): 65-73.

 

105.     Ahn K., Huh J.W., Kim D.S., Ha H.S., Kim Y.J., Lee J.R., and Heui-Soo Kim 2010. Quantitative analysis of alternative transcripts of human PCDH11X/Y genes. Am. J. Med. Genet. B Neuropsychiatr. Genet. 153B(3): 736-744.

 

106.     Huh J.-W., Kim Y.-H., Kim D.-S., Park S.-J., Lee S.-R., Kim S.-H., Kim E., Kim S.-U., Kim M.-S., and Heui-Soo Kim 2010. Alu-derived old world monkeys exonization event and experimental validation of the LEPR gene. Mol. Cells. 30(3): 201-207.

 

107.     Park S.-J., Huh J.-W., Kim D.-S., Ha H.-S., Jung Y.-D., Ahn K., Oh K.B., Park E.-W., Chang K.-T., and Heui-Soo Kim 2010. Analysis of the molecular and regulatory properties of active porcine endogenous retrovirus gamma-1 long terminal repeats in kidney tissues of the NIH-Miniature pig. Mol. Cells. 30(4): 319-325.

 

108.     Kim D.-S., Huh J.-W., Kim Y.-H., Park S.-J., Heui-Soo Kim, and Chang K.-T. 2010. Bioinformatic analysis of TE-spliced new exons within human, mouse and zebrafish genomes. Genomics. 96(5): 266-271.

 

109.     Hong K.-W., Shin Y.-B., Jin H.-S., Lim J.-E., Choi J.-Y., Chang K.-T., Heui-Soo Kim, and Oh B. 2011. Alternative splicing of human height-related zinc finger and BTB domain-containing 38 gene through Alu exonization. Biochem. Genet. 49(5-6): 283-291.

 

110.     Park S.-J., Huh J.-W., Kim Y.-H., Kim J.-S., Song B.-S., Lee S.-R., Kim S.-U., Heui-Soo Kim, Imakawa K., and Chang K.-T. 2011. Quantitative analysis of retromer complex-related genes during embryo development in the mouse. Mol. Cells. 31(5): 431-436.

 

111.     Ahn K., Bae J.-H., Nam K.-H., Lee C.-E., Park K.-D., Lee H.-K., Cho B.-W., and Heui-Soo Kim 2011. Identification of reference genes for normalization of gene expression in thoroughbred and Jeju native horse (Jeju pony) tissues. Genes Genom. 33(3): 245-250.

 

112.     Ha H.-S., Huh J.-W., Gim J.-A., Han K., and Heui-Soo Kim 2011. Transcriptional variations mediated by an alternative promoter of the FPR3 gene. Mamm. Genome. 22(9-10): 621-633.

 

113.     Nam G.-H., Ahn K., Bae J.-H., Han K., Lee C.-E., Park K.-D., Lee S.-H., Cho B.-W., and Heui-Soo Kim 2011. Genomic Structure and Expression Analyses of the PYGM Gene in the Thoroughbred Horse. Zoolog. Sci. 28(4): 276-280.

 

114.     Ahn K., Han K., and Heui-Soo Kim 2011. Quantitative analysis of the HERV pol gene in human tissues. Genes Genom. 33(4): 439-443.

 

115.     Bae J.-H., Ahn K., Nam G.-H., Lee C.-E., Park K.-D., Lee H.-K., Cho B.-W., and Heui-Soo Kim 2011. Molecular Characterization of Alternative Transcripts of the Horse BMAL1 Gene. Zoolog. Sci. 28(9): 671-675.

 

116.     Kim Y.-J., Huh J.-W., Kim D.-S., Han K., Kim H.-M., and Heui-Soo Kim 2011. Evolutionary diversification of DYX1C1 transcripts via an HERV-H LTR integration event. Genes Genet. Syst. 86(4): 277-284.

 

117.     Ha H.-S., Chung W.-K., Ahn K., Bae J.-H., Park S.-J., Moon J.-W., Nam K.-H., Han K., Cho H.-G., and Heui-Soo Kim 2011. Development of GEBRET: a web-based analysis tool for retroelements in primate genomes. Genes Genom. 33(6): 679-684.

 

118.     Jung Y.-D., Huh J.-W., Kim D.-S., Kim Y.-J., Ahn K., Ha H.-S., Lee J.-R., Yi J.M., Moon J.-W., Kim T.-O., Song G.-A., Han K., and Heui-Soo Kim 2011. Quantitative analysis of transcript variants of CHM gene containing LTR12C element in humans. Gene. 489(1): 1-5.

 

119.     Kim D.-W., Jeong S., Kim D.S., Heui-Soo Kim, Seo S.-B., and Hahn Y. 2012. Inactivation of the MSLNL gene encoding mesothelin-like protein during African great ape evolution. Gene. 496(1): 17-21.

 

120.     Nam G.-H., Ahn K., Bae J.-H., Cho B.-W., Park K.-D., Lee H.-K., Yang Y.-M., Kim T.-H., Seong H.-H., Han K., and Heui-Soo Kim 2012. Identification of ORF sequences and exercise-induced expression change in thoroughbred horse OXCT1 gene. Gene. 496(1): 45-48.

 

121.     Ha H.-S., Lee Y.-C., Park S.-J., Jung Y.-D., Ahn K., Moon J.-W., Han K., Oh K.-B., Kim T.-H., Seong H.-H., and Heui-Soo Kim 2012. In vitro CpG methylation and garcinol reduce PERV LTR promoter activity. Genes Genom. 34(2): 217-222.

 

122.     Ha H.-S., Moon J.-W., Gim J.-A., Jung Y.-D., Ahn K., Oh K.-B., Kim T.-H., Seong H.-H., and Heui-Soo Kim 2012. Identification and characterization of transposable element-mediated chimeric transcripts from porcine Refseq and EST databases. Genes Genom. 34(4): 409-414.

 

123.     Moon J.-W., Ahn K., Bae J.-H., Nam G.-H., Cho B.-W., Park K.-D., Lee H.-K., Yang Y.-M., Kim T.-H., Seong H.-H., Han K., and Heui-Soo Kim 2012. mRNA sequence analysis and quantitative expression of the ADAMTS4 gene in the thoroughbred horse. Genes Genom. 34(4): 441-445.

 

124.     Heui-Soo Kim 2012. Genomic impact, chromosomal distribution and transcriptional regulation of HERV elements. Mol. Cells. 33(6): 539-544.

 

125.     Lee J.-R. and Heui-Soo Kim 2012. Radiation-induced retroelement-mediated genomic instability. Biotechnol. Bioprocess Eng. 17(3): 439-445.

 

126.     Lee J.-R., Ahn K., Kim Y.-J., Jung Y.-D., and Heui-Soo Kim 2012. Radiation-induced human endogenous retrovirus (HERV)-R env gene expression by epigenetic control. Radiat. Res. 178(5): 379-384.

 

127.     Park K.-D., Park J., Ko J., Kim B.C., Heui-Soo Kim, Ahn K., Do K.-T., Choi H., Kim H.-M., and Song S. 2012. Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq. BMC Genomics. 13(1): 473.

 

128.     Park S.-J., Huh J.-W., Kim Y.-H., Heui-Soo Kim, and Chang K.-T. 2012. Intron Retention and TE Exonization Events in ZRANB2. Compar. Funct. Genom. 2012.

 

129.     Joung Y.H., Lim E.J., Darvin P., Chung S.C., Jang J.W., Do Park K., Lee H.K., Heui-Soo Kim, Park T., and Yang Y.M. 2012. MSM enhances GH signaling via the Jak2/STAT5b pathway in osteoblast-like cells and osteoblast differentiation through the activation of STAT5b in MSCs.

 

130.     Park S.-J., Huh J.-W., Kim Y.-H., Lee S.-R., Kim S.-H., Kim S.-U., Heui-Soo Kim, Kim M.K., and Chang K.-T. 2013. Selection of internal reference genes for normalization of quantitative reverse transcription polymerase chain reaction (qRT-PCR) analysis in the canine brain and other organs. Mol. Biotechnol. 54(1): 47-57.

 

131.     Ahn K., Gim J.-A., Ha H.-S., Han K., and Heui-Soo Kim 2013. The novel MER transposon-derived miRNAs in human genome. Gene. 512(2): 422-428.

 

132.     Jung Y.-D., Ha H.-S., Park S.-J., Oh K.-B., Im G.-S., Kim T.-H., Seong H.-H., and Heui-Soo Kim 2013. Identification and promoter analysis of PERV LTR subtypes in NIH-miniature pig. Mol. Cells. 35(2): 99-105.

 

133.     Ahn K., Bae J.-H., Gim J.-A., Lee J.-R., Jung Y.-D., Park K.-D., Han K., Cho B.-W., and Heui-Soo Kim 2013. Identification and characterization of transposable elements inserted into the coding sequences of horse genes. Genes Genom. 35(4): 483-489.

 

134.     Jung Y.-D., Ahn K., Kim Y.-J., Bae J.-H., Lee J.-R., and Heui-Soo Kim 2013. Retroelements: molecular features and implications for disease. Genes Genet. Syst. 88(1): 31-43.

 

135.     Kim Y.-J., Jung Y.-D., Kim T.-O., and Heui-Soo Kim 2013. Alu-related transcript of TJP2 gene as a marker for colorectal cancer. Gene. 524(2): 268-274.

 

136.     Jung Y.-D., Lee J.-R., Kim Y.-J., Ha H.-S., Oh K.-B., Im G.-S., Choi B.-H., and Heui-Soo Kim 2013. Promoter activity analysis and methylation characterization of LTR elements of PERVs in NIH miniature pig. Genes Genet. Syst. 88(2): 135-142.

 

137.     Shin W., Lee J., Son S.-Y., Ahn K., Heui-Soo Kim, and Han K. 2013. Human-specific HERV-K insertion causes genomic variations in the human genome. PLoS One. 8(4): e60605.

 

138.     Park S.-J., Kim Y.-H., Lee Y., Kim K.-M., Heui-Soo Kim, Lee S.-R., Kim S.-U., Kim S.-H., Kim J.-S., and Jeong K.-J. 2013. Selection of appropriate reference genes for RT-qPCR analysis in a streptozotocin-induced Alzheimer’s disease model of cynomolgus monkeys (Macaca fascicularis). PLoS One. 8(2): e56034.

 

139.     Han K., Lee J., Heui-Soo Kim, Yang K., and Yi J.M. 2013. DNA methylation of mobile genetic elements in human cancers. Genes Genom. 35(3): 265-271.

 

140.     Bae M.-I., Kim Y.-J., Lee J.-R., Jung Y.-D., and Heui-Soo Kim 2013. A New Exon Derived from a Mammalian Apparent LTR Retrotransposon of the SUPT16H Gene. Int. J. Genomics. 2013: 387594.

 

141.     Joung Y.H., Lim E.J., Darvin P., Jang J.W., Park K.D., Lee H.K., Heui-Soo Kim, Cho B.W., Park T., and Chung S. 2013. Hwanggeumchal sorghum extract enhances BMP7 and GH signaling through the activation of Jak2/STAT5B in MC3T3?E1 osteoblastic cells. Mol. Med. Report. 8(3): 891-896.

142.     Kim H., Lee T., Park W., Lee J.W., Kim J., Lee B.-Y., Ahn H., Moon S., Cho S., Do K.-T., Heui-Soo Kim, Lee H.-K., Lee C.-K., Kong H.-S., Yang Y.-M., Park J., Kim H.-M., Kim B.C., Hwang S., and Bhak J. 2013. Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horse. DNA Res. 20(3): 287-298.

143.     Park S.-J., Kim Y.-H., Huh J.-W., Lee S.-R., Kim S.-H., Kim S.-U., Kim J.-S., Jeong K.-J., Kim K.-M., and Heui-Soo Kim 2013. Selection of new appropriate reference genes for RT-qPCR analysis via transcriptome sequencing of cynomolgus monkeys (Macaca fascicularis). PLoS One. 8(4): e60758.

 

144.     Kim K.-H., Park J.K., Choi Y.-W., Kim Y.-H., Lee E.N., Lee J.-R., Heui-Soo Kim, Baek S.-Y., Kim B.-S., and Lee K.-S. 2013. Hexane extract of aged black garlic reduces cell proliferation and attenuates the expression of ICAM-1 and VCAM?1 in TNF-α-activated human endometrial stromal cells. Int. J. Mol. Med. 32(1): 67-78.

145.     Eo J., Choi B.-H., Jung Y.-D., Kwon Y.-J., Kim T.-H., Seong H.-H., and Heui-Soo Kim 2013. Polymorphism analysis of tyrosine hydroxylase (TH) in military working dogs. Genes Genom. 35(6): 817-821.

 

146.     Eo J. and Heui-Soo Kim 2013. Repeat polymorphism analysis for examining genetic variability and the implications for specific traits in dog breeds. Genes Genet. Syst. 88(5): 273-278.

 

147.     Jo H., Gim J.A., Jeong K.S., Heui-Soo Kim, and Joo G.J. 2014. Application of DNA barcoding for identification of freshwater carnivorous fish diets: Is number of prey items dependent on size class for Micropterus salmoides? Ecol. Evol. 4(2): 219-229.

 

148.     Yim H.-S., Cho Y.S., Guang X., Kang S.G., Jeong J.-Y., Cha S.-S., Oh H.-M., Lee J.-H., Yang E.C., Kwon K.K., Kim Y.J., Kim T.W., Kim W., Jeon J.H., Kim S.-J., Choi D.H., Jho S., Kim H.-M., Ko J., Kim H., Shin Y.-A., Jung H.-J., Zheng Y., Wang Z., Chen Y., Chen M., Jiang A., Li E., Zhang S., Hou H., Kim T.H., Yu L., Liu S., Ahn K., Cooper J., Park S.-G., Hong C.P., Jin W., Heui-Soo Kim, Park C., Lee K., Chun S., Morin P.A., O'Brien S.J., Lee H., Kimura J., Moon D.Y., Manica A., Edwards J., Kim B.C., Kim S., Wang J., Bhak J., Lee H.S., and Lee J.-H. 2014. Minke whale genome and aquatic adaptation in cetaceans. Nat. Genet. 46(1): 88-92.

 

149.     Kang Y.-J., Jo J.-O., Ock M.S., Chang H.-K., Baek K.-W., Lee J.-R., Choi Y.H., Kim W.-J., Leem S.-H., and Heui-Soo Kim 2014. Human ERV3-1 env protein expression in various human tissues and tumours. J. Clin. Pathol. 67(1): 86-90.

 

150.     Eo J., Gim J.-A., Choi B.-H., Park K.-D., Yang Y.-M., Lee H.-K., Do K.-T., Cho B.-W., and Heui-Soo Kim 2014. Genetic profiling of thoroughbred racehorses by microsatellite marker analysis. Genes Genom. 36(1): 119-123.

 

151.     Joung Y.H., Na Y.M., Yoo Y.B., Darvin P., Sp N., Kang D.Y., Kim S.Y., Heui-Soo Kim, Choi Y.H., and Lee H.K. 2014. Combination of AG490, a Jak2 inhibitor, and methylsulfonylmethane synergistically suppresses bladder tumor growth via the Jak2/STAT3 pathway. Int. J. Oncol. 44(3): 883-895.

 

152.     Kwon Y.-J., Choi B.-H., Eo J., Kim C., Jung Y.-D., Lee J.-R., Choi Y., Gim J.-A., Lee D.-H., Ha J.-H., Kim D.-S., Huh J.-W., Kim T.-H., Seong H.-H., and Heui-Soo Kim 2014. Genetic structure and variability of the working dog inferred from microsatellite marker analysis. Genes Genom. 36(2): 197-203.

 

153.     Rhyu D.-W., Kang Y.-J., Ock M.-S., Eo J.-W., Choi Y.-H., Kim W.-J., Leem S.-H., Yi J.-M., Heui-Soo Kim, and Cha H.-J. 2014. Expression of human endogenous retrovirus env genes in the blood of breast cancer patients. Int. J. Mol. Sci. 15(6): 9173-9183.

 

154.     Yoon S.-L., Jeong Y., Heui-Soo Kim, Ahn E.-K., Seol S.-Y., Lee S.-Y., Roh Y.-G., Gim J.-A., Hwang S.Y., and Kang T.-H. 2014. Conservation of intronic minisatellite polymorphisms in the SCK1/SHC2 gene of Hominidae. Genes Genom. 36(3): 375-385.

 

155.     Hwang S., Jung Y.-D., Cho K., Ock S.-A., Oh K.-B., Heui-Soo Kim, Yun I.-J., Ahn C., Park J.-K., and Im S. 2014. No expression of porcine endogenous retrovirus after pig to monkey xenotransplantation. Lab. Anim. Res. 30(2): 90-93.

 

156.     Jeong J.-W., Park S., Park C., Chang Y.-C., Moon D.-O., Kim S.O., Kim G.-Y., Cha H.-J., Heui-Soo Kim, and Choi Y.-W. 2014. N-benzyl-N-methyldecan-1-amine, a phenylamine derivative isolated from garlic cloves, induces G2/M phase arrest and apoptosis in U937 human leukemia cells. Oncol. Rep. 32(1): 373-381.

 

157.     Kim D.H., Yeo S.H., Park J.-M., Choi J.Y., Lee T.-H., Park S.Y., Ock M.S., Eo J., Heui-Soo Kim, and Cha H.-J. 2014. Genetic markers for diagnosis and pathogenesis of Alzheimer's disease. Gene. 545(2): 185-193.

 

158.     Gim J.-A., Ayarpadikannan S., Eo J., Kwon Y.-J., Choi Y., Lee H.-K., Park K.-D., Yang Y.M., Cho B.-W., and Heui-Soo Kim 2014. Transcriptional expression changes of glucose metabolism genes after exercise in thoroughbred horses. Gene. 547(1): 152-158.

 

159.     Mun S., Lee J., Kim Y.-J., Heui-Soo Kim, and Han K. 2014. Chimpanzee-specific endogenous retrovirus generates genomic variations in the chimpanzee genome.

 

160.     Eo J., Cha H.-J., Imai H., Hirai H., and Heui-Soo Kim 2014. Short Communication: Expression Profiles of Endogenous Retroviral Envelopes in Macaca mulatta (Rhesus Monkey). AIDS Res. Hum. Retroviruses. 30(10): 996-1000.

161.     Lee J.-R., Hong C.P., Moon J.-W., Jung Y.-D., Kim D.-S., Kim T.-H., Gim J.-A., Bae J.-H., Choi Y., Eo J., Kwon Y.-J., Song S., Ko J., Yang Y.M., Lee H.-K., Park K.-D., Ahn K., Do K.-T., Ha H.-S., Han K., Yi J.M., Cha H.-J., Cho B.-W., Bhak J., and Heui-Soo Kim 2014. Genome-wide analysis of DNA methylation patterns in horse. BMC Genomics. 15(1): 598.

 

162.     Do K.-T., Kong H.-S., Lee J.-H., Lee H.-K., Cho B.-W., Heui-Soo Kim, Ahn K., and Park K.-D. 2014. Genomic characterization of the Przewalski? s horse inhabiting Mongolian steppe by whole genome re-sequencing. Livest. Sci. 167: 86-91.

 

163.     Choi Y., Jung Y.-D., Ayarpadikannan S., Koga A., Imai H., Hirai H., Roos C., Heui-Soo Kim, and Bureau T. 2014. Novel variable number of tandem repeats of gibbon MAOA gene and its evolutionary significance. Genome. 57(8): 427-432.

 

164.     Lee S.-H., Kang Y.-J., Jo J.-O., Ock M.S., Baek K.-W., Eo J., Lee W.J., Choi Y.H., Kim W.-J., Leem S.-H., Heui-Soo Kim, and Cha H.-J. 2014. Elevation of human ERV3-1 env protein expression in colorectal cancer. J. Clin. Pathol. 67(9): 840-844.

 

165.     Park K.-D., Kim H., Hwang J.Y., Lee C.-K., Do K.-T., Heui-Soo Kim, Yang Y.-M., Kwon Y.-j., Kim J., and Kim H.J. 2014. Copy Number Deletion Has Little Impact on Gene Expression Levels in Racehorses. Asian Australas. J. Anim. Sci. 27(9): 1345-1354.

 

166.     Lee J.-R., Jung Y.-D., Kim Y.-J., Lee H.-E., Jeong H., and Heui-Soo Kim 2014. Identification of L1ASP-derived chimeric transcripts in lung cancer. Genes Genom. 36(6): 853-859.

 

167.     Jeong H., Choi B.-H., Eo J., Kwon Y.-J., Lee H.-E., Choi Y., Gim J.-A., Kim T.-H., Seong H.-H., Lee D.-H., Ha J.-H., Han K.-I., and Heui-Soo Kim 2014. Statistical analysis and genetic diversity of three dog breeds using simple sequence repeats. Genes Genom. 36(6): 883-889.

 

168.     Gim J.-A., Ha H.-S., Ahn K., Kim D.-S., and Heui-Soo Kim 2014. Genome-Wide Identification and Classification of MicroRNAs Derived from Repetitive Elements. Genom. Inform. 12(4): 261-267.

 

169.     Gim J.-A., Lee S., Kim D.-S., Jeong K.-S., Hong C.P., Bae J.-H., Moon J.-W., Choi Y.-S., Cho B.-W., Cho H.-G., Bhak J., and Heui-Soo Kim 2015. HExDB: a database for epigenetic changes occurring after horse exercise. Genes Genom. 37(3): 287-294.

 

170.     Lee H.-E., Choi B.-H., Lee D.-H., Kwon Y.-J., Eo J., Choi Y., Jeong H., Gim J.-A., Kim T.-H., Ha J.-H., Han K.-I., and Heui-Soo Kim 2015. Polymorphism analysis of tyrosine hydroxylase gene variable number of tandem repeats in various Korean dogs. Genes Genom. 37(3): 257-261.

 

171.     Lee H.-E., Eo J., and Heui-Soo Kim 2015. Composition and evolutionary importance of transposable elements in humans and primates. Genes Genom. 37(2): 135-140.

 

172.     Lee J., Kim Y.-J., Mun S., Heui-Soo Kim, and Han K. 2015. Identification of human-specific AluS elements through comparative genomics. Gene. 555(2): 208-216.

 

173.     Ayarpadikannan S., Lee H.-E., Han K., and Heui-Soo Kim 2015. Transposable element-driven transcript diversification and its relevance to genetic disorders. Gene. 558(2): 187-194.

 

174.     Gim J.-A., Lee S., Kim D.-S., Jeong K.-S., Hong C.P., Bae J.-H., Moon J.-W., Choi Y.-S., Cho B.-W., Cho H.-G., Bhak J., and Heui-Soo Kim 2015. HEpD: A database describing epigenetic differences between Thoroughbred and Jeju horses. Gene. 560(1): 83-88.

 

175.     Gim J.-A., Hong C.P., Kim D.-S., Moon J.-W., Choi Y., Eo J., Kwon Y.-J., Lee J.-R., Jung Y.-D., Bae J.-H., Choi B.-H., Ko J., Song S., Ahn K., Ha H.-S., Yang Y.M., Lee H.-K., Park K.-D., Do K.-T., Han K., Yi J.M., Cha H.-J., Ayarpadikannan S., Cho B.-W., Bhak J., and Heui-Soo Kim 2015. Genome-Wide Analysis of DNA Methylation before-and after Exercise in the Thoroughbred Horse with MeDIP-Seq. Mol. Cells. 38(3): 210-220.

 

176.     Preetha N.S., Darvin P., Yoo Y.B., Joung Y.H., Kang D.Y., Kim D.N., Hwang T.S., Kim S.Y., Kim W.S., Lee H.K., Cho B.W., Heui-Soo Kim, Park K.D., Park J.H., Chang S.H., and Yang Y.M. 2015. The combination of methylsulfonylmethane and tamoxifen inhibits the Jak2/STAT5b pathway and synergistically inhibits tumor growth and metastasis in ER-positive breast cancer xenografts. BMC Cancer. 15(1): 474.

 

177.     Gim J.-A., Han K., and Heui-Soo Kim 2015. Identification and expression analysis of human endogenous retrovirus Y (HERV-Y) in various human tissues. Arch. Virol. 160(9): 2161-2168.

 

178.     Song I.-J., Ikram M., Subhan F., Choi D.-J., Lee J.-R., Heui-Soo Kim, Lim Y.-T., and Yoon S. 2015. Molecular characterization and expression analysis of mouse epidermal growth factor-like domain 8. Int. J. Mol. Med. 36(2): 541-550.

 

179.     Han K., Jin H.J., Heui-Soo Kim, and Kim N.-S. 2015. Meeting report: The biology of genomes and proteomes. Genes Genom. 37(7): 567-570.

 

180.     Jeong H., Choi B.-H., Lee H.-E., Gim J.-A., and Heui-Soo Kim 2015. Microsatellite analysis of genetic variation and structure in Korean and exotic dog breeds. Genes Genom.: 37(10): 819-827.

 

181.     Kim Y.-J., Ahn K., Gim J.-A., Oh M.H., Han K., and Heui-Soo Kim 2015. Gene structure variation in segmental duplication block C of human chromosome 7q 11.23 during primate evolution. Gene: 573(2): 285-295.

182.     Park S.Y., Jeong M.S., Heui-Soo Kim, and Jang S.B. 2015. Biochemical and Structural Characterization of Recombinant Human Endogenous Retrovirus?R. Bulletin of the Korean Chemical Society. 36(6): 1661-1668.

183.     Jeong H., Lee K., Choi B.-H., Lee H.-E., Gim J.-A., Lee D.-H., Ha J.-H., Han K.-I., Cho Y., and Heui-Soo Kim 2015. Statistical modeling for selecting a superior working dog using microsatellite loci. Genes Genom.: 37(11): 969-976.

184.     Jo JO, Kang YJ, Ock MS, Song KS, Jeong MJ, Jeong SJ, Choi YH, Ko EJ, Leem SH, Kim S, Heui-Soo Kim and Cha HJ. 2016. Expression profiles of HERV-K Env protein in normal and cancerous tissues. Genes Genom.: 38(1): 91-107.

185.    Eo J, Lee HE, Nam GH, Kwon YJ, Choi Y, Choi BH, Huh JW, Kim M, Lee SE, Seo B, and Heui-Soo Kim. 2016. Association of DNA methylation and monoamine oxidase A gene expression in the brains of different dog breeds. Gene: 580(2):177-182.

186.     Kang JS, Kim DJ, Kim GY, Cha HJ, Kim S, Heui-Soo Kim, Park C, Hwang HJ, Kim BW, Kim CM, Choi YH. 2016. Ethanol extract of Prunus mume fruit attenuates hydrogen peroxide-induced oxidative stress and apoptosis involving Nrf2/HO-1 activation in C2C12 myoblasts. Rev Bras Farmacogn. 26:184-190.

187.     Nam GH, Gim JA, Lee HE, Kim WJ, Jung H, Kim W, Heui-Soo Kim. 2016. Expression and promoter activity of endogenous retroviruses in the Olive flounder (Paralichthys olivaceus). Genes Genom. (IN PRESS).

188.    Lee HE, Selvam A, Heui-Soo Kim. 2016. Role of transposable elements in genomic rearrangement, evolution, gene regulation and epigenetics in primates. Genes Genet. Syst. 90:235:257.

189.    Bin Li, Kozo Watanabe, Dong-Hwan Kim, Sang-Bin Lee, Muyoung Heo, Heui-Soo Kim, Tae-Soo Chon. 2016. Identification of Outlier Loci Responding to Anthropogenic and Natural Selection Pressure in Stream Insects Based on a Self-Organizing Map. Water. 8(5):188.

190.    Jung H, Yoon BH, Kim WJ, Kim DW, Hurwood DA, Lyons RE, Salin KR, Heui-Soo Kim, Baek I, Chand V, Mather PB. 2016. Optimizing Hybrid de Novo Transcriptome Assembly and Extending Genomic Resources for Giant Freshwater Prawns (Macrobrachium rosenbergii): The Identification of Genes and Markers Associated with Reproduction. Int J Mol Sci. 17(5):690.

191.    Kim TO, Park SH, Heui-Soo Kim, Ahuja N, Yi JM. 2016. DNA methylation change in extracellular remodeling pathway genes during the transformation of human mesenchymal stem cells.. Genes Genom. 38:611-617.

192.      Gim JA, Nam GH, Kim WJ, Lee HE, Mishra A, Choe YJ, Park CI, Kim DH, Choi YH, Cha HJ, Yoon DH, Kim S, Heui-Soo Kim. 2016. Detection of LINE RT elements in the olive flounder (Paralichthys olivaceus) genome and expression analysis after infection with S. parauberis.Genes Genom. 38:1105-1110.

193.     Kim DH, Gim JA, Yeo SH,Heui-Soo Kim. 2017. Integrated late onset Alzheimer's disease (LOAD) susceptibility genes: Cholesterol metabolism and trafficking perspectives.Gene. 597:10-16.

194.     Han MH, Lee DS, Jeong JW, Hong SH, Choi IW, Cha HJ, Kim S,Heui-Soo Kim, Park C, Kim GY, Moon SK, Kim WJ, Hyun Choi Y. 2017. Fucoidan Induces ROS-Dependent Apoptosis in 5637 Human Bladder Cancer Cells by Downregulating Telomerase Activity via Inactivation of the PI3K/Akt Signaling Pathway.Drug Dev Res. 78(1):37-48.

195.      Gim JA,Heui-Soo Kim. 2017. Identification and Expression of Equine MER-Derived miRNAs.Mol Cells. 40(4):262-270.

196.     Jeong JW, Cha HJ, Han MH, Hwang SJ, Lee DS, Yoo JS, Choi IW, Kim S,Heui-Soo Kim, Kim GY, Hong SH, Park C, Lee HJ, Choi YH. 2017. Spermidine Protects against Oxidative Stress in Inflammation Models Using Macrophages and Zebrafish. Biomol Ther (Seoul)

197.      Mishra A, Nam GH, Gim JA, Seong M, Choe Y, Lee HE, Jo A, Kim S, Kim DH, Cha HJ, Kang HY, Choi YH, Heui-Soo Kim. 2017. Comparative evaluation of 16S rRNA gene in world-wide strains of Streptococcus iniae and Streptococcus parauberis for early diagnostic marker. Genes Genom. 39: 779-791.

198.     Park HY, Park SH, Jeong JW, Yoon D, Han MH, Lee DS, Choi G, Yim MJ, Lee JM, Kim DH, Kim GY, Choi IW, Kim S, Heui-Soo Kim, Cha HJ, Choi YH. 2017. Induction of p53-Independent Apoptosis and G1 Cell Cycle Arrest by Fucoidan in HCT116 Human Colorectal Carcinoma Cells. Mar Drugs. 15(6). E154.

199.      Kim DH, Gim JA, Mishra A, Lee K, Cho Y,Heui-Soo Kim. 2017. SNP analysis of genes related to cholesterol metabolism and associated with late-onset Alzheimer disease.Genes Genom. 39: 593-600.

200.      Yoon D, Yoon C, Choi H, Noh H, Ok Y, Kim D-H,Heui-Soo Kim, Kim S. 2017. H-NMR-based Metabolomic Study of Miamiensis avidus-infected Olive Flounder. Bull Korean Chem Soc. 38:550-555.

201.      Jo A, Im J, Lee HE, Jang D, Nam GH, Mishra A, Kim WJ, Kim W, Cha HJ, Heui-Soo Kim. 2017.Evolutionary conservation and expression of miR-10a-3p in olive flounder and rock bream. Gene. 628: 16-23.

202.      Kim DH, Gim JA, Yoon D, Kim S, Heui-Soo Kim. 2017. Metabolomics and mitochondrial dysfunction in Alzheimer’s disease. Genes Genom.39:295-300.

203.      Kim DH, Gim JA, Kim KH, Han CW, Jang SB Heui-Soo Kim. 2017. Alzheimer’s disease related genes during primate evolution. Genes Genom. DOI 10.1007/s13258-017-0584.

204.     Mishra A, Nam GH, Gim JA, Lee HE, Jo A, Yoon D, Oh S, Kim S, Kim A, Kim DH, Kim YC, Jeong HD, Cha HJ, Choi YH, Heui-Soo Kim. 2017. Comparative evaluation of MCP gene in worldwide strains of Megalocytivirus (Iridoviridae family) for early diagnostic marker. J Fish Dis. 10:1-12.

205.     Jo A, Lee HE, Heui-Soo Kim. 2017. Genomic Analysis of miR-21-3p and Expression Pattern with Target Gene in Olive Flounder. Genomics & Informatics. 15(3):98-107.

206.     Yun KY, Ko EJ, Kim HY, Lee JY, Eo WK, Ock MS, Kim KH, Cha HJ, Heui-Soo Kim. 2017. Long interspersed element-1 open reading frame 1 protein expression profiles in ovarian cancers. Genes Genome. 39(10):1157-1162.

207.      Kim H, Gim JA, Woo H, Hong J, Kim J, Heui-Soo Kim. 2017. Application of Transposable Elements as Molecular-marker for Cancer Diagnosis. J. Life Sci. 27(10): 1215-1224.

208.      Kim H, Kim A, Kim SM, Nguyen TL, Lim Y, Roh HJ, Kim N, Kim DH, Choi YH, Kim S, Ock MS, Cha HJ, Heui-Soo Kim. 2017. Genome based quantification of Streptococcus parauberis in multiple organs of infected olive flounder. Genes Genome. 39(8):897-902.

209.     Jung YD, Lee HE, Jo A, Hiroo I, Cha HJ, Heui-Soo Kim. 2017. Activity analysis of LTR12C as an effective regulatory element of the RAE1 gene. Gene. 634: 22-28.

210.     Jeong JW, Hwang SJ, Han MH, Lee DS, Yoo JS, Choi IW, Cha HJ, Kim S, Heui-Soo Kim, Kim GY, Jeon YJ, Lee HJ, Park HT, Yoo YH, Choi YH. 2017. Fucoidan inhibits lipopolysaccharide-induced inflammatory responses in RAW 264.7 macrophages and zebrafish larvae Mol Cell Toxicol. 13: 405-417.

211.      Ahn YJ, Markkandan K, Baek IP, Mun S, Lee W, Heui-Soo Kim, Han K. 2018. An efficient and tunable parameter to improve variant calling for whole genome and exome sequencing data. Genes Genom. 40:39-47.

212.      Lee SI, Gim JA, Lim MJ, Heui-Soo Kim, Nam BH, Kim NS. 2018. Ty3/Gypsy retrotransposons in the Pacific abalone Haliotis discus hannai: characterization and use for species identification in the genus Haliotis. Genes Genom. 40:177-187.

213.      Nam GH, Gim JA, Mishra A, Ahn K, Kim S, Kim DH, Cha HJ, Choi YH, Park CI, Heui-Soo Kim. 2018. Identification of transposable elements fused in the exonic region of the olive flounder genome. Genes Genom. https://doi.org/10.1007/s13258-018-0676-2.

 

 

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